27 Mar 2017
##### New R Package: NetworkInference

The package provides an R implementation of the netinf algorithm (Gomez Rodriguez, Leskovec, and Krause, 2010). Given a set of events that spread between a set of nodes the algorithm infers the most likely stable diffusion network that is underlying the diffusion process.

07 Nov 2016
##### Presentation on Word2Vec Embeddings

Slides starting at the general idea of word embeddings, explaining the basics of neural networks and the specifics of Word2Vec.

30 Mar 2016
##### Visualizing the Smith Waterman Local Alignment Algorithm

A d3 visualization of the Smith Waterman Local Alignment Algorithm

24 Mar 2016
##### Basics of Computational Text Analysis in Python

A tutorial for the basics of computational text analysis. For absolute beginners: how do I get from natural language to a term document matrix?

03 Dec 2015
##### PSU ACI Cheatsheet

Materials for the second part of the workshop *Intro to Penn State high performance computing and UNIX command line*. Everything you need to run basic programs on Penn States Advanced Cyber Infrastructure (ACI)

02 Dec 2015
##### UNIX Commandline Cheatsheet

A little collection of basic UNIX commands, for my workshop *Intro to Penn State high performance computing and UNIX command line*